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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913289.1_cds_XP_016463340.1_56472
CDS Infomation

[gene=LOC107786388] [db_xref=GeneID:107786388] [protein=aspartic proteinase PCS1-like] [protein_id=XP_016463340.1] [location=3568..4890] [gbkey=CDS]
Sequence

ATGAAACTTCCCTTGTTTTTCAGATTATTAATAAGCTTCTTGTTCTTACTATACAAACCC
CTGAAATGTTTTTCCTCTACTACTTTCAACTCCCAGAATAATTCATCAATGTTAATTTTG
GCGCTAAAAACTCAAGAAATGTCATCTGGGTCCTTCCCTAGAGCTGCAAACAAGCTTCCA
TTTACACACAATGTAACACTTACTGTTTCTCTATCAGTTGGTAGACCTCCACAGAATGTT
ACAATGGTACTTGATACAGGCAGTGAACTCTCATGGCTACATTGCAACTCAACCCGAATC
AACCAACCTCTTTTCAACCCGAACCGGTCAGTTTCTTACCGACCCGTTTCTTGTTCATCA
CCAACTTGTACGACCCGAACACAAGATTTCTCTATACCAGCTTCTTGTGACTCCAAGAAT
TTATGTCATGCCGTGCTTTCTTATGCAGATGCTTCATCTTCTGAAGGGAATTTAGCTATG
GATACGTTTAATATTGGTGGGTCAAATTTTTCGGATACTATATTCGGGTGTATGGATTCG
GGTTTCAGTAGTAATTCGGATGAAGATTCAAAGACAACTGGGTTAATGGGTATGAACCGT
GGAGCACTCTCATTTGTTTCACAAATGGGGTTTAAGAAGTTTTCATATTGCATTTCGGGA
TCGGATTTTAACGGCGTTTTGCTTCTTGGTGAGTCTAATTTTACTTGGGTTTTGCCGTTA
AATTACACGCCGTTAGTAGAAATTTCACTTCCATTACCTTACTTTGATAGAGTAGCATAT
ACTGTTCAACTTGAAGGTATTAAAGTTTCGGATAAATTACTTTCAATACCAAAATCCGTA
TTTGTACCCGATCATACCGGAGCGGGTCAAACCATGGTTGATTCGGGTACCCAATTTACA
TTCCTACTTGGTCCAGCTTATACTGCACTAAGGAATGAGTTTTTGAATCAAACTAAGGCA
ACTCTTAAGGTTCTTGAGGATCAAGATTTTGTTTTTCAAGGTGCAATGGACTTGTGTTAT
CGTGTACCTGTTAACGCAACGAAGTTACCTGCATTACCATCGGTGAGCTTAGTATTTCGA
GGCGCGGAAATAACGGTTTTGGGAGAGCGGTTGTTGTATCGGGTACCCGGTGAAATTCGG
GGCAATGACTCGATACATTGCTTCACGTTTGGAAATTCCGAGCTACTAGCTATCGAGGCG
TATATTATTGGTCACCATCATCAACAAAATGTGTGGGTCGAGTATGATCTTGAAAAATCT
CGCATTGGTTTTGCTCAAGTACGGTGTGATGTAGCGAGTCAAAGATTTGGTCTCTATCGT
TAA

Peptide Sequence

PEP ID

XP_016463340.1
PEP Infomation

PREDICTED: aspartic proteinase PCS1-like [Nicotiana tabacum]
Sequence

MKLPLFFRLLISFLFLLYKPLKCFSSTTFNSQNNSSMLILALKTQEMSSGSFPRAANKLP
FTHNVTLTVSLSVGRPPQNVTMVLDTGSELSWLHCNSTRINQPLFNPNRSVSYRPVSCSS
PTCTTRTQDFSIPASCDSKNLCHAVLSYADASSSEGNLAMDTFNIGGSNFSDTIFGCMDS
GFSSNSDEDSKTTGLMGMNRGALSFVSQMGFKKFSYCISGSDFNGVLLLGESNFTWVLPL
NYTPLVEISLPLPYFDRVAYTVQLEGIKVSDKLLSIPKSVFVPDHTGAGQTMVDSGTQFT
FLLGPAYTALRNEFLNQTKATLKVLEDQDFVFQGAMDLCYRVPVNATKLPALPSVSLVFR
GAEITVLGERLLYRVPGEIRGNDSIHCFTFGNSELLAIEAYIIGHHHQQNVWVEYDLEKS
RIGFAQVRCDVASQRFGLYR

Transcript Sequence

Gene sequence data has not been registered.